Overview¶
File submission for CGAP¶
Description¶
This is a tool for uploading files to CGAP.
System Requirements¶
- Python 3.7, 3.8 or 3.9
- Pip (>=20.0.0)
- Virtualenv (>=16.0.0)
What To Do Next¶
Advanced users who have already installed Python can proceed to the installation instructions. Less experienced users should start with the basic setup instructions, which will introduce some basics for working with the terminal and installing the dependencies to run this package.
- Overview
- Awscli/Rclone Submission (experimental)
- Basic Setup
- Installing SubmitCGAP
- Getting Started
- submit_cgap package
- Subpackages
- submit_cgap.scripts package
- submit_cgap.tests package
- Submodules
- submit_cgap.tests.test_auth module
- submit_cgap.tests.test_base module
- submit_cgap.tests.test_exceptions module
- submit_cgap.tests.test_make_sample_fastq_file module
- submit_cgap.tests.test_resume_uploads module
- submit_cgap.tests.test_submission module
- submit_cgap.tests.test_submit_metadata_bundle module
- submit_cgap.tests.test_upload_item_data module
- submit_cgap.tests.test_utils module
- Module contents
- Submodules
- submit_cgap.auth module
- submit_cgap.base module
- submit_cgap.exceptions module
- submit_cgap.submission module
- submit_cgap.utils module
- Module contents
- Subpackages